- Predicted Gene MLOC_75554
MLOC_75554 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.3476 | 7.69937 | 7.7118 | 9.1469 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.67626 | 11.6887 | 15.3869 | 9.9496 |
| INF1 | Young developing inflorescences (5mm) | 6.34285 | 9.48713 | 10.5029 | 8.31252 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.2688 | 10.9495 | 10.8457 | 13.4166 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.5962 | 9.62142 | 11.4656 | 13.1343 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.32754 | 5.98453 | 7.78817 | 20.1901 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.08284 | 5.94088 | 6.94091 | 6.93474 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.76803 | 2.27326 | 2.26294 | 5.55998 |
CDS Structure of MLOC_75554
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75554.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g54930.1 |
+2 |
0.0 |
707 |
353/429 (82%) |
13101.m05774 protein one zinc finger protein, putative, expressed |
| TAIR PP10 |
AT1G28520.2 |
+2 |
2e-138 |
421 |
258/517 (50%) |
| Symbols: VOZ1 | vascular plant one zinc finger protein | chr1:10029713-10031479 FORWARD LENGTH=486 |
