MLOC_7555 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.307508 | 0 | 0.267054 | 0.253067 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.160446 | 0 | 0 | 0.161962 |
| INF1 | Young developing inflorescences (5mm) | 0.35276 | 0.268549 | 0.636907 | 0.368152 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.549904 | 0.646163 | 0.209936 | 0.57297 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0753961 | 0.0252344 | 0.185013 | 0.181737 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.19316 | 0.904705 | 0.622034 | 0.864207 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.193779 | 0 | 0.508118 |
CDS Structure of MLOC_7555
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7555.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g05860.1 |
-2 |
4e-52 |
184 |
85/90 (94%) |
13105.m00623 protein retrotransposon protein, putative, unclassified, expressed |
| TAIR PP10 |
AT4G35800.1 |
-2 |
2e-45 |
164 |
74/90 (82%) |
| Symbols: NRPB1, RPB1, RNA_POL_II_LSRNA_POL_II_LS, RNA_POL_II_LS | RNA polymerase II large subunit | chr4:16961115-16967892 REVERSE LENGTH=1839 |