MLOC_75528 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains457.148371.957353.811418.262
LEAShoots from the seedlings (10 cm shoot stage)0.09909910.1736520.05565270.114462
INF1Young developing inflorescences (5mm)0.12649700.03205430.0709363
INF2Developing inflorescences (1-1.5 cm)0.1363550.05172820.03333360.0949685
ROORoots from the seedlings (10 cm shoot stage)257.249218.258140.887264.376
NODDeveloping tillers at six leaf stage, 3rd internode0.02137750.01082890.009066310.0326548
CAR5Developing grain, bracts removed (5 DPA)0.03294480.06211800.0577556
CAR15Developing grain, bracts removed (15 DPA)0.1461480.02803640.03550450.193047



CDS Structure of MLOC_75528






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75528.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248293.1NoneNoneNoneNone
MLOC_75528.1CUST_6518_PI427708080AvailableAvailablecontig_68153 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g06100.1 +1 2e-156 452 239/359 (67%) 13108.m00605 protein O-methyltransferase, putative, expressed
TAIR PP10 AT5G54160.1 +1 4e-122 364 184/339 (54%) | Symbols: ATOMT1, OMT1 | O-methyltransferase 1 | chr5:21982075-21984167 FORWARD LENGTH=363