MLOC_75526 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1936770.2628080.2755280.266784
LEAShoots from the seedlings (10 cm shoot stage)0.3274620.7960350.8143360.57342
INF1Young developing inflorescences (5mm)0.3130110.2212160.2838660.265061
INF2Developing inflorescences (1-1.5 cm)0.5201940.2315810.243210.396925
ROORoots from the seedlings (10 cm shoot stage)0.1422520.07797320.09672990.124461
NODDeveloping tillers at six leaf stage, 3rd internode0.3112020.7544430.9298282.43287
CAR5Developing grain, bracts removed (5 DPA)0.3009410.5270340.4037360.453108
CAR15Developing grain, bracts removed (15 DPA)0.1902920.1224740.1188960.373725



CDS Structure of MLOC_75526






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75526.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75526.1NoneAvailableAvailablecontig_68149 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g49040.1 +1 8e-25 107 95/186 (51%) 13106.m05230 protein Myb-like DNA-binding domain containing protein, putative, expressed
TAIR PP10 AT3G13040.2 +1 2e-15 79 79/189 (42%) myb-like HTH transcriptional regulator family protein | chr3:4172415-4174456 REVERSE LENGTH=449