MLOC_75519 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.07472.585243.170613.29548
LEAShoots from the seedlings (10 cm shoot stage)5.770493.634262.948073.71564
INF1Young developing inflorescences (5mm)2.65882.975422.89462.76918
INF2Developing inflorescences (1-1.5 cm)14.881211.747113.83416.4366
ROORoots from the seedlings (10 cm shoot stage)2.492233.138232.364544.15447
NODDeveloping tillers at six leaf stage, 3rd internode0.8740481.405680.547574.50193
CAR5Developing grain, bracts removed (5 DPA)16.36116.717717.053719.0438
CAR15Developing grain, bracts removed (15 DPA)16.007314.828216.680141.735



CDS Structure of MLOC_75519






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75519.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359122NoneNoneNoneNone
MLOC_75519.1CUST_6516_PI427708080AvailableAvailablecontig_68115 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g08140.1 +3 2e-170 497 274/428 (64%) 13107.m00803 protein heat stress transcription factor, putative, expressed
TAIR PP10 AT3G22830.1 +3 3e-96 306 159/284 (56%) | Symbols: AT-HSFA6B, HSFA6B | heat shock transcription factor A6B | chr3:8078981-8080895 FORWARD LENGTH=406