MLOC_75515 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.375992.659973.313353.09923
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.2565150.9125220.9944651.06281
NODDeveloping tillers at six leaf stage, 3rd internode0.0624118000.00688589
CAR5Developing grain, bracts removed (5 DPA)0.163670.1884520.1689830.183777
CAR15Developing grain, bracts removed (15 DPA)00.03682030.04913540.185821



CDS Structure of MLOC_75515






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75515.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75515.1CUST_16188_PI427708080AvailableAvailablecontig_68101 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g16800.1 +3 5e-146 420 201/275 (73%) 13102.m01879 protein expansin precursor, putative, expressed
TAIR PP10 AT1G20190.1 +3 4e-115 340 154/225 (68%) | Symbols: ATEXPA11, EXP11, ATEXP11, ATHEXP ALPHA 1.14, EXPA11 | expansin 11 | chr1:6998762-6999710 REVERSE LENGTH=252