MLOC_75498 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.944474.748595.361895.462
LEAShoots from the seedlings (10 cm shoot stage)15.746512.974814.991614.0003
INF1Young developing inflorescences (5mm)5.342235.929488.005025.83245
INF2Developing inflorescences (1-1.5 cm)12.377713.972514.823715.5907
ROORoots from the seedlings (10 cm shoot stage)10.13689.660836.6991113.1206
NODDeveloping tillers at six leaf stage, 3rd internode6.0098.394977.1524230.4834
CAR5Developing grain, bracts removed (5 DPA)9.456949.893378.545259.61332
CAR15Developing grain, bracts removed (15 DPA)3.693713.817754.097249.19006



CDS Structure of MLOC_75498






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75498.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364795NoneNoneNoneNone
AK372489NoneNoneNoneNone
MLOC_75498.4CUST_6514_PI427708080AvailableAvailablecontig_68052 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g40260.1 -3 0.0 850 426/479 (89%) 13103.m04359 protein Regulator of chromosome condensation domain containing protein, expressed
TAIR PP10 AT3G02300.1 -3 0.0 675 337/461 (73%) Regulator of chromosome condensation (RCC1) family protein | chr3:461551-463929 FORWARD LENGTH=471