MLOC_75485 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.047543.218733.839454.16112
LEAShoots from the seedlings (10 cm shoot stage)1.714380.3120710.1623840.591172
INF1Young developing inflorescences (5mm)12.46712.28312.258410.8446
INF2Developing inflorescences (1-1.5 cm)9.3926710.12919.5264710.9855
ROORoots from the seedlings (10 cm shoot stage)4.856072.984396.383273.92058
NODDeveloping tillers at six leaf stage, 3rd internode1.065360.6731123.822073.19242
CAR5Developing grain, bracts removed (5 DPA)1.178281.627191.318321.45837
CAR15Developing grain, bracts removed (15 DPA)0.2929270.06815450.4282820.605889



CDS Structure of MLOC_75485






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75485.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75485.1CUST_10097_PI427708083AvailableAvailablecontig_68013 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g39410.1 -1 2e-43 145 71/84 (85%) 13110.m03607 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed
TAIR PP10 AT5G59970.1 -1 8e-44 145 71/84 (85%) Histone superfamily protein | chr5:24146352-24146663 REVERSE LENGTH=103