MLOC_75464 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.5516.523117.922617.2581
LEAShoots from the seedlings (10 cm shoot stage)6.186930.6549522.047952.1956
INF1Young developing inflorescences (5mm)23.776830.82629.192624.856
INF2Developing inflorescences (1-1.5 cm)18.066620.337919.104922.0967
ROORoots from the seedlings (10 cm shoot stage)9.976289.403268.561589.10986
NODDeveloping tillers at six leaf stage, 3rd internode0.2560890.3195590.05734510.544779
CAR5Developing grain, bracts removed (5 DPA)7.524157.265846.724327.40014
CAR15Developing grain, bracts removed (15 DPA)0.8051770.2843550.9319621.5605



CDS Structure of MLOC_75464






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75464.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75464.1CUST_16180_PI427708080AvailableAvailablecontig_67958 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g14210.1 +3 1e-154 456 266/390 (68%) 13103.m01662 protein glycosyl hydrolases family 17, putative, expressed
TAIR PP10 AT1G32860.1 +3 4e-92 293 170/343 (50%) Glycosyl hydrolase superfamily protein | chr1:11907308-11908803 REVERSE LENGTH=426