MLOC_75445 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.143031000.130949
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.6562360.3654711.131961.54635
CAR5Developing grain, bracts removed (5 DPA)3.327512.586412.687663.21783
CAR15Developing grain, bracts removed (15 DPA)000.08623690.203345



CDS Structure of MLOC_75445






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75445.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75445.1CUST_10092_PI427708083AvailableAvailablecontig_6793 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g31090.1 +1 4e-36 133 78/146 (53%) 13111.m03011 protein transferase family protein, putative, expressed
TAIR PP10 AT5G63560.1 +1 2e-34 127 72/145 (50%) HXXXD-type acyl-transferase family protein | chr5:25449517-25451234 FORWARD LENGTH=426