- Predicted Gene MLOC_75410
MLOC_75410 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_75410_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_75410_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.52035 | 2.18165 | 2.43736 | 2.04787 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.575615 | 0 | 0 | 0.108576 |
INF1 | Young developing inflorescences (5mm) | 7.81858 | 7.02603 | 7.74972 | 5.48913 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.54298 | 6.28562 | 5.44826 | 5.81526 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.824353 | 1.15141 | 1.14666 | 1.27174 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0187121 | 0 | 0.0535142 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.51306 | 1.33432 | 1.29781 | 1.15113 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.342826 | 0.315729 | 0.4112 | 0.596037 |
CDS Structure of MLOC_75410
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75410.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g01220.1 |
+3 |
1e-65 |
229 |
161/375 (43%) |
13112.m00031 protein expressed protein |
TAIR PP10 |
AT5G60150.1 |
+3 |
4e-20 |
94 |
54/119 (45%) |
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:24218211-24223245 FORWARD LENGTH=1195 |