MLOC_75410 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.520352.181652.437362.04787
LEAShoots from the seedlings (10 cm shoot stage)0.575615000.108576
INF1Young developing inflorescences (5mm)7.818587.026037.749725.48913
INF2Developing inflorescences (1-1.5 cm)5.542986.285625.448265.81526
ROORoots from the seedlings (10 cm shoot stage)0.8243531.151411.146661.27174
NODDeveloping tillers at six leaf stage, 3rd internode00.018712100.0535142
CAR5Developing grain, bracts removed (5 DPA)1.513061.334321.297811.15113
CAR15Developing grain, bracts removed (15 DPA)0.3428260.3157290.41120.596037



CDS Structure of MLOC_75410






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75410.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75410.2CUST_16172_PI427708080AvailableAvailablecontig_67853 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g01220.1 +3 1e-65 229 161/375 (43%) 13112.m00031 protein expressed protein
TAIR PP10 AT5G60150.1 +3 4e-20 94 54/119 (45%) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:24218211-24223245 FORWARD LENGTH=1195