MLOC_75382 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains611.614352.785360.722437.705
LEAShoots from the seedlings (10 cm shoot stage)175.04103.038228.801152.117
INF1Young developing inflorescences (5mm)560.777577.313577.134502.468
INF2Developing inflorescences (1-1.5 cm)296.276319.505449.995392.735
ROORoots from the seedlings (10 cm shoot stage)540.305412.232442.722552.137
NODDeveloping tillers at six leaf stage, 3rd internode60.374745.793875.2325178.557
CAR5Developing grain, bracts removed (5 DPA)431.026456.154392.909434.736
CAR15Developing grain, bracts removed (15 DPA)109.329111.592102.479257.649



CDS Structure of MLOC_75382






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75382.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75382.1CUST_10080_PI427708083AvailableAvailablecontig_67797 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g39500.1 +3 2e-31 110 50/51 (98%) 13109.m03961 protein ubiquitin fusion protein, putative, expressed
TAIR PP10 AT3G52590.1 +3 3e-29 104 47/50 (94%) | Symbols: UBQ1, EMB2167, ERD16, HAP4 | ubiquitin extension protein 1 | chr3:19505668-19506681 FORWARD LENGTH=128