MLOC_75374 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.6677.8697210.90678.03626
LEAShoots from the seedlings (10 cm shoot stage)9.02386.211029.376935.6775
INF1Young developing inflorescences (5mm)12.366712.069112.76468.31566
INF2Developing inflorescences (1-1.5 cm)6.732525.822277.492295.85616
ROORoots from the seedlings (10 cm shoot stage)12.03447.135498.610827.60234
NODDeveloping tillers at six leaf stage, 3rd internode7.547872.486465.031367.98478
CAR5Developing grain, bracts removed (5 DPA)6.092765.543856.564774.69436
CAR15Developing grain, bracts removed (15 DPA)2.620611.520592.816244.36105



CDS Structure of MLOC_75374






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75374.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75374.1NoneAvailableAvailablecontig_677633 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g45510.3 -2 5e-23 96 42/53 (79%) 13106.m04799 protein thioredoxin, putative, expressed
TAIR PP10 AT2G35010.2 -2 3e-14 71 34/63 (54%) | Symbols: ATO1, TO1 | thioredoxin O1 | chr2:14754398-14755888 FORWARD LENGTH=194