- Predicted Gene MLOC_75371
MLOC_75371 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_75371_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_75371_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.805468 | 0.531317 | 0.967868 | 0.556291 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.994475 | 0.920251 | 1.6746 | 0.803407 |
INF1 | Young developing inflorescences (5mm) | 1.40438 | 1.13457 | 1.24473 | 0.811113 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.60881 | 1.22685 | 1.3211 | 1.17506 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.98676 | 1.20455 | 1.12564 | 1.25573 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.59035 | 1.33694 | 1.64076 | 3.5263 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.365133 | 0.28891 | 0.310037 | 0.232248 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.203699 | 0.205409 | 0.0748647 | 0.339438 |
CDS Structure of MLOC_75371
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75371.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g07050.1 |
-2 |
1e-36 |
102 |
45/52 (87%) |
13105.m00763 protein pre-mRNA-processing-splicing factor 8, putative, expressed |
TAIR PP10 |
AT1G80070.1 |
-2 |
4e-29 |
81 |
34/52 (65%) |
| Symbols: SUS2, EMB33, EMB177, EMB14 | Pre-mRNA-processing-splicing factor | chr1:30118052-30127574 FORWARD LENGTH=2359 |