MLOC_75362 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.423294.046274.670854.3418
LEAShoots from the seedlings (10 cm shoot stage)4.58735.226516.096684.8935
INF1Young developing inflorescences (5mm)4.607794.384885.567744.34465
INF2Developing inflorescences (1-1.5 cm)6.443185.358726.076646.7717
ROORoots from the seedlings (10 cm shoot stage)3.71186.183195.166947.58031
NODDeveloping tillers at six leaf stage, 3rd internode5.154834.099144.572315.3055
CAR5Developing grain, bracts removed (5 DPA)4.870534.359715.013144.87242
CAR15Developing grain, bracts removed (15 DPA)6.714236.860585.9308916.0515



CDS Structure of MLOC_75362






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75362.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372773NoneNoneNoneNone
MLOC_75362.1CUST_6502_PI427708080AvailableAvailablecontig_6773 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g39090.2 -1 2e-73 241 165/352 (47%) 13112.m04042 protein expressed protein
TAIR PP10 AT4G33890.2 -1 2e-42 156 123/362 (34%) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:16250057-16251085 FORWARD LENGTH=342