- Predicted Gene MLOC_75343
MLOC_75343 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 32.6721 | 29.7101 | 28.3544 | 29.5721 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.6254 | 8.73057 | 9.68137 | 9.86323 |
| INF1 | Young developing inflorescences (5mm) | 37.9488 | 36.8738 | 35.1181 | 30.9024 |
| INF2 | Developing inflorescences (1-1.5 cm) | 24.8032 | 31.4774 | 29.5473 | 31.2212 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 25.3422 | 26.3625 | 24.3612 | 30.8895 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.91376 | 2.38901 | 5.64551 | 9.85975 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 31.4874 | 32.0441 | 31.2665 | 30.8726 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.65745 | 6.76108 | 6.30371 | 13.962 |
CDS Structure of MLOC_75343
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75343.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g41260.1 |
+2 |
0.0 |
691 |
405/485 (84%) |
13107.m04291 protein PPR repeat domain containing protein, putative, expressed |
| TAIR PP10 |
AT5G60960.1 |
+2 |
1e-116 |
362 |
201/422 (48%) |
Pentatricopeptide repeat (PPR) superfamily protein | chr5:24528423-24529988 REVERSE LENGTH=521 |
