MLOC_75332 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.144163.111362.134062.08222
LEAShoots from the seedlings (10 cm shoot stage)10.349627.401318.667214.2483
INF1Young developing inflorescences (5mm)5.059575.844746.810434.46888
INF2Developing inflorescences (1-1.5 cm)9.676868.158719.333418.92939
ROORoots from the seedlings (10 cm shoot stage)2.783643.842763.966774.06721
NODDeveloping tillers at six leaf stage, 3rd internode2.614344.425117.2655915.7779
CAR5Developing grain, bracts removed (5 DPA)3.052433.131023.74192.83002
CAR15Developing grain, bracts removed (15 DPA)2.003592.130892.319084.38088



CDS Structure of MLOC_75332






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75332.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365359NoneNoneNoneNone
MLOC_75332.6CUST_6499_PI427708080AvailableAvailablecontig_67679 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g11960.1 -3 0.0 1172 640/947 (68%) 13102.m01296 protein ABC transporter, ATP-binding protein, putative
TAIR PP10 AT3G47780.1 -3 0.0 777 462/940 (49%) | Symbols: ATATH6, ATH6 | ABC2 homolog 6 | chr3:17624500-17628972 FORWARD LENGTH=935