MLOC_7532 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains30.495527.512129.049330.1945
LEAShoots from the seedlings (10 cm shoot stage)23.466815.526417.836717.3651
INF1Young developing inflorescences (5mm)30.875629.451526.878424.9814
INF2Developing inflorescences (1-1.5 cm)17.286422.102319.98122.4943
ROORoots from the seedlings (10 cm shoot stage)26.157926.881426.419333.9079
NODDeveloping tillers at six leaf stage, 3rd internode14.670117.972933.58268.2958
CAR5Developing grain, bracts removed (5 DPA)27.062828.167327.438927.3729
CAR15Developing grain, bracts removed (15 DPA)4.320484.545943.575199.73922



CDS Structure of MLOC_7532






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7532.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7532.1CUST_13225_PI427708083AvailableAvailablecontig_139465 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g38760.1 -3 0.0 569 299/320 (93%) 13107.m04011 protein HEAT repeat family protein, putative, expressed
TAIR PP10 AT5G19820.1 -3 3e-137 446 231/320 (72%) | Symbols: emb2734 | ARM repeat superfamily protein | chr5:6695731-6701247 REVERSE LENGTH=1116