MLOC_75304 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.413758.279848.074178.18081
LEAShoots from the seedlings (10 cm shoot stage)1.8793700.3540790.872174
INF1Young developing inflorescences (5mm)0.1641190.1341010.04604260.104621
INF2Developing inflorescences (1-1.5 cm)0.09978430.019894600.0778948
ROORoots from the seedlings (10 cm shoot stage)37.902622.931416.954823.2319
NODDeveloping tillers at six leaf stage, 3rd internode34.43661.47670.199418103.187
CAR5Developing grain, bracts removed (5 DPA)0.077824300.1434960.112851
CAR15Developing grain, bracts removed (15 DPA)00.019469200.0681557



CDS Structure of MLOC_75304






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75304.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75304.1CUST_16160_PI427708080AvailableAvailablecontig_67581 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g62600.1 +1 0.0 854 456/585 (78%) 13101.m06707 protein laccase precursor protein, putative
TAIR PP10 AT2G29130.1 +1 0.0 733 353/548 (64%) | Symbols: LAC2, ATLAC2 | laccase 2 | chr2:12525189-12527699 REVERSE LENGTH=573