MLOC_7530 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_7530_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_7530_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.56878 | 2.50669 | 1.80935 | 2.55047 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.17014 | 0.451072 | 0.410324 | 0.599625 |
INF1 | Young developing inflorescences (5mm) | 6.49681 | 8.67141 | 9.39195 | 7.37344 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.60398 | 5.6199 | 6.87799 | 7.2359 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.590463 | 1.85097 | 2.67138 | 2.3272 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0643071 | 0.0965045 | 0.129469 | 0.342456 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.74606 | 1.97593 | 2.27476 | 2.15296 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.470594 | 0.794147 | 0.532142 | 1.55835 |
CDS Structure of MLOC_7530
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7530.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g22870.1 |
+1 |
2e-61 |
206 |
119/148 (80%) |
13104.m02123 protein rpp14 family protein, expressed |
TAIR PP10 |
AT1G04635.1 |
+1 |
3e-44 |
153 |
71/110 (65%) |
| Symbols: EMB1687 | ribonuclease P family protein / Rpp14 family protein | chr1:1291350-1291805 FORWARD LENGTH=151 |