MLOC_7530 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.568782.506691.809352.55047
LEAShoots from the seedlings (10 cm shoot stage)1.170140.4510720.4103240.599625
INF1Young developing inflorescences (5mm)6.496818.671419.391957.37344
INF2Developing inflorescences (1-1.5 cm)6.603985.61996.877997.2359
ROORoots from the seedlings (10 cm shoot stage)0.5904631.850972.671382.3272
NODDeveloping tillers at six leaf stage, 3rd internode0.06430710.09650450.1294690.342456
CAR5Developing grain, bracts removed (5 DPA)1.746061.975932.274762.15296
CAR15Developing grain, bracts removed (15 DPA)0.4705940.7941470.5321421.55835



CDS Structure of MLOC_7530






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7530.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7530.1CUST_16159_PI427708080AvailableAvailablecontig_139464 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g22870.1 +1 2e-61 206 119/148 (80%) 13104.m02123 protein rpp14 family protein, expressed
TAIR PP10 AT1G04635.1 +1 3e-44 153 71/110 (65%) | Symbols: EMB1687 | ribonuclease P family protein / Rpp14 family protein | chr1:1291350-1291805 FORWARD LENGTH=151