- Predicted Gene MLOC_75294
MLOC_75294 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.19275 | 2.06504 | 2.53609 | 1.69046 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.2517 | 4.41436 | 3.71591 | 5.46555 |
| INF1 | Young developing inflorescences (5mm) | 3.52382 | 2.37675 | 2.55543 | 2.13451 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.36886 | 7.34214 | 8.3076 | 7.64002 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.9835 | 4.50763 | 3.7705 | 4.59194 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.0704 | 15.2791 | 10.183 | 45.2377 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 19.8583 | 18.6383 | 16.9454 | 15.666 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.720798 | 0.874637 | 0.777606 | 1.50074 |
CDS Structure of MLOC_75294
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75294.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g50330.1 |
+3 |
0.0 |
1207 |
586/720 (81%) |
13102.m05711 protein RNA-dependent RNA polymerase, putative, expressed |
| TAIR PP10 |
AT1G14790.1 |
+3 |
0.0 |
1192 |
631/1106 (57%) |
| Symbols: RDR1, ATRDRP1 | RNA-dependent RNA polymerase 1 | chr1:5094317-5097817 REVERSE LENGTH=1107 |