MLOC_75288 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains109.79998.167398.6564110.324
LEAShoots from the seedlings (10 cm shoot stage)27.81730.825323.800724.6504
INF1Young developing inflorescences (5mm)57.607659.08461.114154.0794
INF2Developing inflorescences (1-1.5 cm)54.84644.35154.314960.1279
ROORoots from the seedlings (10 cm shoot stage)73.527456.0784.845981.2685
NODDeveloping tillers at six leaf stage, 3rd internode18.782220.215830.486277.813
CAR5Developing grain, bracts removed (5 DPA)147.813157.931155.823168.279
CAR15Developing grain, bracts removed (15 DPA)467.155431.693440.4921143.28



CDS Structure of MLOC_75288






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75288.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364536NoneNoneNoneNone
MLOC_75288.1CUST_6493_PI427708080AvailableAvailablecontig_6755 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g29180.1 +1 0.0 715 353/375 (94%) 13106.m03012 protein erythronate-4-phosphate dehydrogenase domain containing protein, expressed
TAIR PP10 AT5G14780.1 +1 0.0 607 299/354 (84%) | Symbols: FDH | formate dehydrogenase | chr5:4777043-4779190 FORWARD LENGTH=384