MLOC_75285 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains47.852937.265541.107639.8389
LEAShoots from the seedlings (10 cm shoot stage)52.40797.122522.022622.309
INF1Young developing inflorescences (5mm)22.994922.83120.497319.0241
INF2Developing inflorescences (1-1.5 cm)13.74314.805114.154815.8834
ROORoots from the seedlings (10 cm shoot stage)20.265923.224622.33124.7157
NODDeveloping tillers at six leaf stage, 3rd internode46.546833.767113.64882.407
CAR5Developing grain, bracts removed (5 DPA)69.308573.093870.454570.0445
CAR15Developing grain, bracts removed (15 DPA)2.43251.779793.649185.9777



CDS Structure of MLOC_75285






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75285.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249157.1NoneNoneNoneNone
MLOC_75285.1CUST_6492_PI427708080AvailableAvailablecontig_67544 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g34120.1 +1 0.0 642 314/348 (90%) 13106.m03525 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT5G45910.1 +1 4e-105 326 168/343 (49%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:18620420-18622264 REVERSE LENGTH=372