MLOC_75278 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.386052.869032.26922.58267
LEAShoots from the seedlings (10 cm shoot stage)2.904284.204287.011793.95998
INF1Young developing inflorescences (5mm)4.079744.206035.054153.80814
INF2Developing inflorescences (1-1.5 cm)2.673053.268773.24483.36656
ROORoots from the seedlings (10 cm shoot stage)3.805634.128114.94994.89511
NODDeveloping tillers at six leaf stage, 3rd internode1.417031.796791.999275.98639
CAR5Developing grain, bracts removed (5 DPA)1.816961.982222.029521.89714
CAR15Developing grain, bracts removed (15 DPA)0.3769610.2903530.2108110.780974



CDS Structure of MLOC_75278






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75278.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354991NoneNoneNoneNone
MLOC_75278.2CUST_6491_PI427708080AvailableAvailablecontig_67530 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g17750.1 +2 3e-150 438 252/344 (73%) 13109.m01707 protein oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed
TAIR PP10 AT5G15940.1 +2 5e-97 301 184/339 (54%) NAD(P)-binding Rossmann-fold superfamily protein | chr5:5202801-5204715 FORWARD LENGTH=364