MLOC_75275 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4684382.28612.617951.17517
LEAShoots from the seedlings (10 cm shoot stage)2.38260.2764140.1078240.812169
INF1Young developing inflorescences (5mm)45.10643.605244.854526.2738
INF2Developing inflorescences (1-1.5 cm)42.904539.512134.759632.4038
ROORoots from the seedlings (10 cm shoot stage)0.6365022.199063.040251.45782
NODDeveloping tillers at six leaf stage, 3rd internode0.06680280.06707220.08967330.173569
CAR5Developing grain, bracts removed (5 DPA)11.940610.916813.838.08236
CAR15Developing grain, bracts removed (15 DPA)4.536484.505733.641886.71988



CDS Structure of MLOC_75275






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75275.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75275.1CUST_13224_PI427708083AvailableAvailablecontig_67526 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g08190.5 +1 4e-37 141 66/75 (88%) 13101.m00851 protein transcriptional corepressor LEUNIG, putative, expressed
TAIR PP10 AT4G32551.1 +1 7e-34 135 62/75 (83%) | Symbols: LUG, RON2 | LisH dimerisation motif;WD40/YVTN repeat-like-containing domain | chr4:15707863-15713359 FORWARD LENGTH=931