- Predicted Gene MLOC_75265
MLOC_75265 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.95051 | 3.98401 | 4.77169 | 3.79177 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.60386 | 0.2433 | 0.385032 | 0.62196 |
INF1 | Young developing inflorescences (5mm) | 2.24869 | 3.28632 | 2.00111 | 2.08534 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.7591 | 2.15883 | 2.4877 | 2.58898 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.34833 | 4.3984 | 5.09218 | 4.46887 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.51827 | 3.64578 | 0.374134 | 8.4533 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0638572 | 0 | 0 | 0.115831 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.104102 | 0.144822 | 0.112143 | 0.311466 |
CDS Structure of MLOC_75265
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75265.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g11410.1 |
+3 |
4e-104 |
322 |
198/360 (55%) |
13111.m01211 protein OsIAA27 - Auxin-responsive Aux/IAA gene family member, expressed |
TAIR PP10 |
AT3G04730.1 |
+3 |
3e-18 |
85 |
60/178 (34%) |
| Symbols: IAA16 | indoleacetic acid-induced protein 16 | chr3:1288993-1290415 REVERSE LENGTH=236 |