MLOC_75265 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.950513.984014.771693.79177
LEAShoots from the seedlings (10 cm shoot stage)1.603860.24330.3850320.62196
INF1Young developing inflorescences (5mm)2.248693.286322.001112.08534
INF2Developing inflorescences (1-1.5 cm)2.75912.158832.48772.58898
ROORoots from the seedlings (10 cm shoot stage)3.348334.39845.092184.46887
NODDeveloping tillers at six leaf stage, 3rd internode3.518273.645780.3741348.4533
CAR5Developing grain, bracts removed (5 DPA)0.0638572000.115831
CAR15Developing grain, bracts removed (15 DPA)0.1041020.1448220.1121430.311466



CDS Structure of MLOC_75265






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75265.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366587NoneNoneNoneNone
MLOC_75265.1CUST_18457_PI427708080AvailableAvailablecontig_6750 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g11410.1 +3 4e-104 322 198/360 (55%) 13111.m01211 protein OsIAA27 - Auxin-responsive Aux/IAA gene family member, expressed
TAIR PP10 AT3G04730.1 +3 3e-18 85 60/178 (34%) | Symbols: IAA16 | indoleacetic acid-induced protein 16 | chr3:1288993-1290415 REVERSE LENGTH=236