MLOC_75262 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains525.425397.389343.407557.81
LEAShoots from the seedlings (10 cm shoot stage)181.28420.119133.037674.4852
INF1Young developing inflorescences (5mm)1028.13960.87880.0881084.15
INF2Developing inflorescences (1-1.5 cm)830.2181096.86888.0721477.37
ROORoots from the seedlings (10 cm shoot stage)232.166305.717320.942526.559
NODDeveloping tillers at six leaf stage, 3rd internode4.926837.739294.5179930.5
CAR5Developing grain, bracts removed (5 DPA)269.163271.005245.915387.1
CAR15Developing grain, bracts removed (15 DPA)26.882315.611929.97376.6146



CDS Structure of MLOC_75262






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75262.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376446NoneNoneNoneNone
MLOC_75262.1CUST_488_PI427708083AvailableAvailablecontig_67492 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g38300.1 -1 6e-55 175 90/91 (99%) 13108.m04061 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed
TAIR PP10 AT5G22880.1 -1 3e-54 172 88/91 (97%) | Symbols: H2B, HTB2 | histone B2 | chr5:7652130-7652567 REVERSE LENGTH=145