MLOC_75225 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains75.118163.106965.356271.397
LEAShoots from the seedlings (10 cm shoot stage)46.003225.925118.644226.6496
INF1Young developing inflorescences (5mm)80.585287.708288.736379.7384
INF2Developing inflorescences (1-1.5 cm)63.521570.046970.640880.662
ROORoots from the seedlings (10 cm shoot stage)61.51856.343560.469674.9604
NODDeveloping tillers at six leaf stage, 3rd internode47.340852.612552.6614187.809
CAR5Developing grain, bracts removed (5 DPA)116.762117.021117.037124.667
CAR15Developing grain, bracts removed (15 DPA)32.483124.993629.578973.2848



CDS Structure of MLOC_75225






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75225.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251901.1NoneNoneNoneNone
MLOC_75225.1CUST_6487_PI427708080AvailableAvailablecontig_67416 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g43090.1 -2 0.0 585 296/340 (87%) 13101.m04443 protein oxidoreductase, aldo/keto reductase family protein, putative, expressed
TAIR PP10 AT1G60690.1 -2 1e-121 363 202/340 (59%) NAD(P)-linked oxidoreductase superfamily protein | chr1:22349892-22351668 REVERSE LENGTH=345