- Predicted Gene MLOC_75223
MLOC_75223 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 15.8129 | 13.5195 | 11.9339 | 13.9306 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.12674 | 10.9958 | 18.5565 | 10.0278 |
| INF1 | Young developing inflorescences (5mm) | 1.70515 | 1.19127 | 0.552104 | 1.04559 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.171834 | 0.0284761 | 0.134457 | 0.133529 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 25.8125 | 26.0617 | 15.116 | 27.1548 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 25.6223 | 23.7702 | 16.8651 | 54.5857 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.05935 | 0.908259 | 0.499284 | 0.896824 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.144872 | 0.318734 | 0.10313 | 0.562431 |
CDS Structure of MLOC_75223
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75223.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g41470.2 |
+1 |
2e-69 |
224 |
155/270 (57%) |
13108.m04458 protein proteophosphoglycan ppg4, putative, expressed |
| TAIR PP10 |
AT3G25070.1 |
+1 |
2e-12 |
67 |
36/74 (49%) |
| Symbols: RIN4 | RPM1 interacting protein 4 | chr3:9132458-9133747 FORWARD LENGTH=211 |
