- Predicted Gene MLOC_75214
MLOC_75214 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 111.49 | 76.8775 | 78.5632 | 88.2058 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 40.9499 | 17.4214 | 21.5464 | 22.3836 |
| INF1 | Young developing inflorescences (5mm) | 137.03 | 142.168 | 144.173 | 124.844 |
| INF2 | Developing inflorescences (1-1.5 cm) | 142.438 | 122.009 | 131.987 | 149.709 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 64.401 | 64.6928 | 71.8147 | 76.7115 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.6057 | 12.259 | 20.8302 | 41.0068 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 60.6137 | 73.2209 | 65.3487 | 68.8458 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 13.172 | 11.0147 | 9.27557 | 27.7868 |
CDS Structure of MLOC_75214
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75214.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g60400.1 |
+3 |
2e-98 |
289 |
142/142 (100%) |
13103.m06626 protein 40S ribosomal protein S23, putative, expressed |
| TAIR PP10 |
AT5G02960.1 |
+3 |
1e-93 |
276 |
136/142 (96%) |
Ribosomal protein S12/S23 family protein | chr5:693280-694396 REVERSE LENGTH=142 |
