MLOC_75175 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.1026.109626.690498.58098
LEAShoots from the seedlings (10 cm shoot stage)33.70960.8782942.638810.0164
INF1Young developing inflorescences (5mm)1.050350.5679270.8697390.816635
INF2Developing inflorescences (1-1.5 cm)1.426582.104492.440912.72764
ROORoots from the seedlings (10 cm shoot stage)105.3146.187996.3214819.8664
NODDeveloping tillers at six leaf stage, 3rd internode0.05072620.5386510.2062951.5506
CAR5Developing grain, bracts removed (5 DPA)10.471412.15861.936929.99261
CAR15Developing grain, bracts removed (15 DPA)1.862232.211271.009325.14368



CDS Structure of MLOC_75175






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75175.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75175.1CUST_16142_PI427708080AvailableAvailablecontig_67285 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g52150.2 +3 9e-69 218 144/223 (65%) 13102.m05943 protein heat shock 22 kDa protein, mitochondrial precursor, putative, expressed
TAIR PP10 AT4G25200.1 +3 1e-25 103 86/220 (39%) | Symbols: ATHSP23.6-MITO, HSP23.6-MITO | mitochondrion-localized small heat shock protein 23.6 | chr4:12917089-12917858 FORWARD LENGTH=210