MLOC_75172 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.070473200.0684763
LEAShoots from the seedlings (10 cm shoot stage)1.350690.2615720.6744890.655685
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.09952080.1153420.06414150.133622
NODDeveloping tillers at six leaf stage, 3rd internode00.0082572300.0647298
CAR5Developing grain, bracts removed (5 DPA)0.04849050.06897550.0703230.0663103
CAR15Developing grain, bracts removed (15 DPA)0.0353724000.123085



CDS Structure of MLOC_75172






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75172.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359429NoneNoneNoneNone
MLOC_75172.2CUST_6482_PI427708080AvailableAvailablecontig_67283 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g32952.1 +2 0.0 763 387/554 (70%) 13109.m03305 protein L-ascorbate oxidase precursor, putative, expressed
TAIR PP10 AT4G39830.1 +2 0.0 648 321/551 (58%) Cupredoxin superfamily protein | chr4:18479103-18481184 FORWARD LENGTH=582