MLOC_751 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1180820.15203600.105657
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)000.05916870.0142077
INF2Developing inflorescences (1-1.5 cm)00.039696500.0178725
ROORoots from the seedlings (10 cm shoot stage)00.2505270.1949590.205977
NODDeveloping tillers at six leaf stage, 3rd internode00.08293240.04852540.239736
CAR5Developing grain, bracts removed (5 DPA)0.8472010.6127981.329980.81166
CAR15Developing grain, bracts removed (15 DPA)00.1676020.07995110.195704



CDS Structure of MLOC_751






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_751.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_751.1CUST_10043_PI427708083AvailableAvailablecontig_105557 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g05880.1 +3 2e-12 66 31/39 (79%) 13106.m00583 protein profilin domain containing protein, expressed
TAIR PP10 AT2G19770.1 +3 2e-11 62 29/39 (74%) | Symbols: PRF5 | profilin 5 | chr2:8519885-8521119 REVERSE LENGTH=134