MLOC_75088 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.28461.819681.395581.68937
LEAShoots from the seedlings (10 cm shoot stage)7.451799.416512.27898.71395
INF1Young developing inflorescences (5mm)2.858743.670753.492983.13304
INF2Developing inflorescences (1-1.5 cm)5.157345.042294.661695.91674
ROORoots from the seedlings (10 cm shoot stage)1.950392.495932.2763.04417
NODDeveloping tillers at six leaf stage, 3rd internode1.415562.522033.491288.724
CAR5Developing grain, bracts removed (5 DPA)2.044872.566482.055972.39689
CAR15Developing grain, bracts removed (15 DPA)1.825631.646041.465424.255



CDS Structure of MLOC_75088






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75088.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361094NoneNoneNoneNone
AK363909NoneNoneNoneNone
AK375890NoneNoneNoneNone
MLOC_75088.5CUST_6468_PI427708080AvailableAvailablecontig_67108 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g37470.1 -1 3e-161 484 236/304 (78%) 13104.m03578 protein oxidoreductase, aldo/keto reductase family protein, putative, expressed
TAIR PP10 AT1G59950.1 -1 1e-100 323 158/302 (52%) NAD(P)-linked oxidoreductase superfamily protein | chr1:22068033-22070588 REVERSE LENGTH=320