MLOC_75066 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.409919.266117.892515.8105
LEAShoots from the seedlings (10 cm shoot stage)498.773830.237870520.493
INF1Young developing inflorescences (5mm)12.23818.648859.567428.00844
INF2Developing inflorescences (1-1.5 cm)8.578096.843719.383177.75915
ROORoots from the seedlings (10 cm shoot stage)2.447914.747512.14864.97603
NODDeveloping tillers at six leaf stage, 3rd internode280.316202.471401.375584.578
CAR5Developing grain, bracts removed (5 DPA)120.361160.919113.724111.331
CAR15Developing grain, bracts removed (15 DPA)13.108914.91912.735630.0702



CDS Structure of MLOC_75066






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75066.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK253042.1NoneNoneNoneNone
MLOC_75066.1CUST_18454_PI427708080AvailableAvailablecontig_67073 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g01210.1 -3 4e-59 196 93/97 (96%) 13106.m00020 protein plastocyanin, chloroplast precursor, putative, expressed
TAIR PP10 AT1G20340.1 -3 1e-39 143 69/98 (70%) | Symbols: DRT112, PETE2 | Cupredoxin superfamily protein | chr1:7042770-7043273 REVERSE LENGTH=167