MLOC_75052 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.436152.707462.877892.37357
LEAShoots from the seedlings (10 cm shoot stage)0.9248420.7823690.1629260.543989
INF1Young developing inflorescences (5mm)00.1043050.06132480.0694918
INF2Developing inflorescences (1-1.5 cm)0.04502190.12291700.126863
ROORoots from the seedlings (10 cm shoot stage)0.1032090.055948600.135567
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.1641780.09830180.05788890.104074
CAR15Developing grain, bracts removed (15 DPA)34.685325.367427.746969.4808



CDS Structure of MLOC_75052






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75052.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75052.1CUST_13215_PI427708083AvailableAvailablecontig_67034 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g15420.1 +3 3e-38 145 67/94 (71%) 13106.m01705 protein asparagine synthetase, putative, expressed
TAIR PP10 AT3G47340.3 +3 3e-46 165 75/94 (80%) | Symbols: ASN1, DIN6, AT-ASN1 | glutamine-dependent asparagine synthase 1 | chr3:17438787-17441043 REVERSE LENGTH=456