- Predicted Gene MLOC_75052
MLOC_75052 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_75052_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_75052_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.43615 | 2.70746 | 2.87789 | 2.37357 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.924842 | 0.782369 | 0.162926 | 0.543989 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.104305 | 0.0613248 | 0.0694918 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0450219 | 0.122917 | 0 | 0.126863 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.103209 | 0.0559486 | 0 | 0.135567 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.164178 | 0.0983018 | 0.0578889 | 0.104074 |
CAR15 | Developing grain, bracts removed (15 DPA) | 34.6853 | 25.3674 | 27.7469 | 69.4808 |
CDS Structure of MLOC_75052
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75052.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g15420.1 |
+3 |
3e-38 |
145 |
67/94 (71%) |
13106.m01705 protein asparagine synthetase, putative, expressed |
TAIR PP10 |
AT3G47340.3 |
+3 |
3e-46 |
165 |
75/94 (80%) |
| Symbols: ASN1, DIN6, AT-ASN1 | glutamine-dependent asparagine synthase 1 | chr3:17438787-17441043 REVERSE LENGTH=456 |