MLOC_75034 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.563068.521118.422678.66055
LEAShoots from the seedlings (10 cm shoot stage)5.495414.475615.567114.29838
INF1Young developing inflorescences (5mm)9.7310210.122911.49438.30865
INF2Developing inflorescences (1-1.5 cm)11.32428.6059110.165910.3047
ROORoots from the seedlings (10 cm shoot stage)12.97367.0951212.800310.1732
NODDeveloping tillers at six leaf stage, 3rd internode6.655096.3091614.388623.4875
CAR5Developing grain, bracts removed (5 DPA)8.2310810.30159.95818.78256
CAR15Developing grain, bracts removed (15 DPA)5.064794.006875.2980510.3082



CDS Structure of MLOC_75034






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75034.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75034.1CUST_13213_PI427708083AvailableAvailablecontig_66993 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g29400.1 +2 6e-25 104 67/86 (78%) 13102.m03203 protein expressed protein
TAIR PP10 AT5G43970.1 +2 1e-17 83 39/50 (78%) | Symbols: TOM22-V, TOM9-2, ATTOM22-V | translocase of outer membrane 22-V | chr5:17692888-17693187 FORWARD LENGTH=99