MLOC_75029 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains121.1492.372983.1034100.135
LEAShoots from the seedlings (10 cm shoot stage)56.625236.539850.791143.6053
INF1Young developing inflorescences (5mm)203.916203.921203.964174.318
INF2Developing inflorescences (1-1.5 cm)125.99168.264184.096176.876
ROORoots from the seedlings (10 cm shoot stage)91.9572106.787123.873136.324
NODDeveloping tillers at six leaf stage, 3rd internode42.60744.027758.568162.825
CAR5Developing grain, bracts removed (5 DPA)85.111588.675789.054386.2514
CAR15Developing grain, bracts removed (15 DPA)19.491621.449422.147348.1484



CDS Structure of MLOC_75029






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75029.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372059NoneNoneNoneNone
MLOC_75029.1CUST_6460_PI427708080AvailableAvailablecontig_6699 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g43620.1 +1 3e-46 152 75/86 (87%) 13111.m04347 protein LSM domain containing protein, expressed
TAIR PP10 AT4G30220.1 +1 5e-44 145 69/86 (80%) | Symbols: RUXF | small nuclear ribonucleoprotein F | chr4:14803100-14804259 REVERSE LENGTH=88