MLOC_75027 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains30.54814.921824.103316.0374
LEAShoots from the seedlings (10 cm shoot stage)15.303914.230722.767110.7325
INF1Young developing inflorescences (5mm)23.986434.528940.704417.8841
INF2Developing inflorescences (1-1.5 cm)22.47324.513325.243118.8479
ROORoots from the seedlings (10 cm shoot stage)45.343824.038723.846623.8542
NODDeveloping tillers at six leaf stage, 3rd internode23.436430.734743.183175.7177
CAR5Developing grain, bracts removed (5 DPA)15.44816.334317.178210.7283
CAR15Developing grain, bracts removed (15 DPA)4.057183.911554.651936.32338



CDS Structure of MLOC_75027






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75027.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75027.1CUST_13212_PI427708083AvailableAvailablecontig_66983 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g48230.1 -1 2e-11 64 32/36 (89%) 13106.m05128 protein DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed
TAIR PP10None-----