MLOC_75025 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains38.994129.77131.880734.0092
LEAShoots from the seedlings (10 cm shoot stage)13.945918.142621.633814.3939
INF1Young developing inflorescences (5mm)0.4316310.44880.2056340.329447
INF2Developing inflorescences (1-1.5 cm)0.2095690.3709790.574260.423564
ROORoots from the seedlings (10 cm shoot stage)75.792448.246341.624656.3457
NODDeveloping tillers at six leaf stage, 3rd internode17.622711.53337.4889927.1383
CAR5Developing grain, bracts removed (5 DPA)16.959416.711218.70617.3608
CAR15Developing grain, bracts removed (15 DPA)26.868730.368329.35572.7812



CDS Structure of MLOC_75025






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75025.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_75025.1CUST_13211_PI427708083AvailableAvailablecontig_66983 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g47700.1 +1 4e-154 456 224/234 (96%) 13107.m05093 protein NAD dependent epimerase/dehydratase family domain containing protein, expressed
TAIR PP10 AT3G62830.2 +1 9e-155 457 222/237 (94%) | Symbols: UXS2, ATUXS2 | NAD(P)-binding Rossmann-fold superfamily protein | chr3:23232539-23235353 FORWARD LENGTH=445