- Predicted Gene MLOC_75025
MLOC_75025 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 38.9941 | 29.771 | 31.8807 | 34.0092 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.9459 | 18.1426 | 21.6338 | 14.3939 |
INF1 | Young developing inflorescences (5mm) | 0.431631 | 0.4488 | 0.205634 | 0.329447 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.209569 | 0.370979 | 0.57426 | 0.423564 |
ROO | Roots from the seedlings (10 cm shoot stage) | 75.7924 | 48.2463 | 41.6246 | 56.3457 |
NOD | Developing tillers at six leaf stage, 3rd internode | 17.6227 | 11.5333 | 7.48899 | 27.1383 |
CAR5 | Developing grain, bracts removed (5 DPA) | 16.9594 | 16.7112 | 18.706 | 17.3608 |
CAR15 | Developing grain, bracts removed (15 DPA) | 26.8687 | 30.3683 | 29.355 | 72.7812 |
CDS Structure of MLOC_75025
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75025.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g47700.1 |
+1 |
4e-154 |
456 |
224/234 (96%) |
13107.m05093 protein NAD dependent epimerase/dehydratase family domain containing protein, expressed |
TAIR PP10 |
AT3G62830.2 |
+1 |
9e-155 |
457 |
222/237 (94%) |
| Symbols: UXS2, ATUXS2 | NAD(P)-binding Rossmann-fold superfamily protein | chr3:23232539-23235353 FORWARD LENGTH=445 |