MLOC_75016 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.291252.321446.592447.2278
LEAShoots from the seedlings (10 cm shoot stage)47.285745.569331.126639.8278
INF1Young developing inflorescences (5mm)109.12797.300583.733987.9821
INF2Developing inflorescences (1-1.5 cm)90.3902100.63685.7592112.696
ROORoots from the seedlings (10 cm shoot stage)10.252225.506918.673633.8027
NODDeveloping tillers at six leaf stage, 3rd internode16.95217.56316.545272.1517
CAR5Developing grain, bracts removed (5 DPA)70.232568.79972.312977.0991
CAR15Developing grain, bracts removed (15 DPA)30.543329.401125.483770.9072



CDS Structure of MLOC_75016






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75016.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368017NoneNoneNoneNone
MLOC_75016.2CUST_6457_PI427708080AvailableAvailablecontig_6696 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g36710.1 -3 4e-79 271 169/211 (80%) 13106.m03798 protein transposon protein, putative, CACTA, En/Spm sub-class, expressed
TAIR PP10 AT2G03150.1 -3 2e-85 306 260/842 (31%) | Symbols: emb1579 | ATP/GTP-binding protein family | chr2:952313-959004 FORWARD LENGTH=1340