MLOC_75013 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.786586.000586.304795.09661
LEAShoots from the seedlings (10 cm shoot stage)10.44615.473884.237855.50791
INF1Young developing inflorescences (5mm)10.675313.217814.40169.94565
INF2Developing inflorescences (1-1.5 cm)51.23429.191939.525140.3925
ROORoots from the seedlings (10 cm shoot stage)7.9038910.24979.8738210.4169
NODDeveloping tillers at six leaf stage, 3rd internode17.807325.183414.810666.7256
CAR5Developing grain, bracts removed (5 DPA)5.850816.14896.603755.4835
CAR15Developing grain, bracts removed (15 DPA)3.368822.512033.815366.83244



CDS Structure of MLOC_75013






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_75013.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375459NoneNoneNoneNone
MLOC_75013.2CUST_18453_PI427708080AvailableAvailablecontig_66956 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g58490.1 +2 0.0 1583 792/922 (86%) 13102.m06772 protein PINHEAD, putative, expressed
TAIR PP10 AT1G48410.1 +2 0.0 1384 689/890 (77%) | Symbols: AGO1 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | chr1:17886285-17891892 REVERSE LENGTH=1048