- Predicted Gene MLOC_75003
MLOC_75003 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.7491 | 16.4079 | 16.48 | 17.5353 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 106.351 | 131.546 | 119.218 | 109.276 |
| INF1 | Young developing inflorescences (5mm) | 9.96403 | 8.45807 | 8.80445 | 8.67035 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.88162 | 6.5505 | 8.01829 | 8.29176 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.29614 | 2.47067 | 2.73386 | 3.19155 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 31.5747 | 32.6374 | 43.1951 | 116.925 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 12.9783 | 14.9118 | 12.814 | 16.3493 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.33937 | 1.24336 | 0.666612 | 3.10805 |
CDS Structure of MLOC_75003
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75003.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g10750.1 |
+1 |
2e-103 |
311 |
180/238 (76%) |
13109.m00950 protein rhodanese-like, putative, expressed |
| TAIR PP10 |
AT2G42220.1 |
+1 |
2e-78 |
246 |
123/183 (67%) |
Rhodanese/Cell cycle control phosphatase superfamily protein | chr2:17592105-17593305 FORWARD LENGTH=234 |
