- Predicted Gene MLOC_75001
MLOC_75001 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_75001_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_75001_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 34.9052 | 28.2711 | 33.9008 | 28.278 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 33.225 | 23.3947 | 27.5389 | 22.2766 |
INF1 | Young developing inflorescences (5mm) | 24.8797 | 26.0475 | 26.0105 | 19.1803 |
INF2 | Developing inflorescences (1-1.5 cm) | 29.3013 | 31.8824 | 29.8526 | 29.8308 |
ROO | Roots from the seedlings (10 cm shoot stage) | 41.6429 | 40.0608 | 33.2855 | 42.2002 |
NOD | Developing tillers at six leaf stage, 3rd internode | 49.0646 | 56.5101 | 48.0763 | 158.374 |
CAR5 | Developing grain, bracts removed (5 DPA) | 41.9487 | 40.5973 | 45.1624 | 36.0882 |
CAR15 | Developing grain, bracts removed (15 DPA) | 28.6628 | 26.3528 | 26.5313 | 55.8627 |
CDS Structure of MLOC_75001
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_75001.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g54624.1 |
+3 |
0.0 |
715 |
360/401 (90%) |
13102.m06256 protein zinc finger family protein, putative, expressed |
TAIR PP10 |
AT4G32600.1 |
+3 |
1e-143 |
428 |
224/413 (54%) |
RING/U-box superfamily protein | chr4:15724010-15725737 FORWARD LENGTH=453 |