MLOC_750 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_750_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_750_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.73673 | 1.9017 | 1.16935 | 1.87085 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.64531 | 2.2087 | 2.36056 | 1.7269 |
INF1 | Young developing inflorescences (5mm) | 0.708032 | 0.517352 | 1.19089 | 0.705917 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.800488 | 0.687543 | 0.697679 | 0.79554 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.51064 | 2.44686 | 4.74391 | 3.32219 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.69397 | 9.72157 | 13.6504 | 30.5464 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.83894 | 2.90293 | 2.26307 | 2.33401 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.64532 | 1.98316 | 2.70253 | 5.81205 |
CDS Structure of MLOC_750
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_750.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g03200.2 |
+1 |
1e-12 |
67 |
49/85 (58%) |
13103.m00298 protein hydrolase, alpha/beta fold family protein, putative, expressed |
TAIR PP10 |
AT2G19770.1 |
+1 |
4e-11 |
61 |
28/38 (74%) |
| Symbols: PRF5 | profilin 5 | chr2:8519885-8521119 REVERSE LENGTH=134 |