MLOC_750 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.736731.90171.169351.87085
LEAShoots from the seedlings (10 cm shoot stage)1.645312.20872.360561.7269
INF1Young developing inflorescences (5mm)0.7080320.5173521.190890.705917
INF2Developing inflorescences (1-1.5 cm)0.8004880.6875430.6976790.79554
ROORoots from the seedlings (10 cm shoot stage)5.510642.446864.743913.32219
NODDeveloping tillers at six leaf stage, 3rd internode4.693979.7215713.650430.5464
CAR5Developing grain, bracts removed (5 DPA)1.838942.902932.263072.33401
CAR15Developing grain, bracts removed (15 DPA)2.645321.983162.702535.81205



CDS Structure of MLOC_750






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_750.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_750.1CUST_16119_PI427708080AvailableAvailablecontig_105557 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g03200.2 +1 1e-12 67 49/85 (58%) 13103.m00298 protein hydrolase, alpha/beta fold family protein, putative, expressed
TAIR PP10 AT2G19770.1 +1 4e-11 61 28/38 (74%) | Symbols: PRF5 | profilin 5 | chr2:8519885-8521119 REVERSE LENGTH=134