MLOC_74972 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.37849.528710.799811.6921
LEAShoots from the seedlings (10 cm shoot stage)9.987979.8735510.35279.25246
INF1Young developing inflorescences (5mm)12.651217.232717.899513.3586
INF2Developing inflorescences (1-1.5 cm)12.23912.624413.979414.5565
ROORoots from the seedlings (10 cm shoot stage)7.0449.377110.222212.2686
NODDeveloping tillers at six leaf stage, 3rd internode23.920824.186626.054790.1059
CAR5Developing grain, bracts removed (5 DPA)7.037988.932759.046058.69029
CAR15Developing grain, bracts removed (15 DPA)2.065981.98222.393074.89761



CDS Structure of MLOC_74972






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74972.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373750NoneNoneNoneNone
MLOC_74972.2CUST_6449_PI427708080AvailableAvailablecontig_66888 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g02130.1 +2 9e-100 305 211/287 (74%) 13109.m00128 protein expressed protein
TAIR PP10 AT5G15880.1 +2 2e-56 191 144/290 (50%) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:5185788-5187461 FORWARD LENGTH=348