MLOC_74956 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.08486660.2241710.235284
LEAShoots from the seedlings (10 cm shoot stage)0.130592000.120426
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.03016520.07261060.169373
CAR5Developing grain, bracts removed (5 DPA)0.1616310.07597530.1608110.168024
CAR15Developing grain, bracts removed (15 DPA)0.1290390.2219370.661470.754215



CDS Structure of MLOC_74956






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74956.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74956.1CUST_10023_PI427708083AvailableAvailablecontig_66850 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g02520.2 +1 1e-89 271 128/158 (81%) 13105.m00221 protein cupin domain containing protein, expressed
TAIR PP10 AT2G28680.1 +1 4e-69 218 105/156 (67%) RmlC-like cupins superfamily protein | chr2:12303118-12304747 REVERSE LENGTH=356