MLOC_7493 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 57.9589 | 85.1086 | 70.2217 | 95.1565 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 55.6121 | 51.3437 | 46.7703 | 53.2006 |
| INF1 | Young developing inflorescences (5mm) | 132.305 | 124.778 | 104.47 | 123.575 |
| INF2 | Developing inflorescences (1-1.5 cm) | 125.934 | 118.738 | 117.833 | 151.531 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 51.114 | 87.6651 | 75.7168 | 131.83 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 33.286 | 32.5148 | 38.9039 | 133.857 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 89.6648 | 83.004 | 83.6992 | 97.263 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 44.2447 | 45.6497 | 39.8611 | 119.024 |
CDS Structure of MLOC_7493
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7493.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g12850.1 |
+1 |
1e-107 |
334 |
185/235 (79%) |
13102.m01415 protein RNA recognition motif containing protein, expressed |
| TAIR PP10 |
AT3G13224.2 |
+1 |
7e-68 |
228 |
109/171 (64%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:4254848-4256621 FORWARD LENGTH=358 |
