- Predicted Gene MLOC_74910
MLOC_74910 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.60537 | 1.96399 | 2.77078 | 2.37834 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 51.6321 | 102.431 | 107.991 | 84.7338 |
INF1 | Young developing inflorescences (5mm) | 2.47235 | 2.88471 | 2.34658 | 2.49776 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.740056 | 0.648939 | 0.649719 | 0.861847 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.438823 | 0.979256 | 1.01614 |
NOD | Developing tillers at six leaf stage, 3rd internode | 33.7372 | 27.6061 | 24.5337 | 98.329 |
CAR5 | Developing grain, bracts removed (5 DPA) | 23.5182 | 28.1093 | 27.3414 | 30.7801 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.85478 | 1.83031 | 2.1029 | 5.11392 |
CDS Structure of MLOC_74910
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_74910.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g51300.1 |
+1 |
0.0 |
536 |
280/362 (77%) |
13104.m05225 protein peroxidase precursor, putative, expressed |
TAIR PP10 |
AT4G09010.1 |
+1 |
7e-138 |
404 |
219/357 (61%) |
| Symbols: APX4, TL29 | ascorbate peroxidase 4 | chr4:5777502-5779338 REVERSE LENGTH=349 |