MLOC_74910 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.605371.963992.770782.37834
LEAShoots from the seedlings (10 cm shoot stage)51.6321102.431107.99184.7338
INF1Young developing inflorescences (5mm)2.472352.884712.346582.49776
INF2Developing inflorescences (1-1.5 cm)0.7400560.6489390.6497190.861847
ROORoots from the seedlings (10 cm shoot stage)00.4388230.9792561.01614
NODDeveloping tillers at six leaf stage, 3rd internode33.737227.606124.533798.329
CAR5Developing grain, bracts removed (5 DPA)23.518228.109327.341430.7801
CAR15Developing grain, bracts removed (15 DPA)1.854781.830312.10295.11392



CDS Structure of MLOC_74910






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74910.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248560.1NoneNoneNoneNone
MLOC_74910.1CUST_6440_PI427708080AvailableAvailablecontig_66757 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g51300.1 +1 0.0 536 280/362 (77%) 13104.m05225 protein peroxidase precursor, putative, expressed
TAIR PP10 AT4G09010.1 +1 7e-138 404 219/357 (61%) | Symbols: APX4, TL29 | ascorbate peroxidase 4 | chr4:5777502-5779338 REVERSE LENGTH=349