MLOC_74909 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains48.850526.99429.281638.2227
LEAShoots from the seedlings (10 cm shoot stage)65.309434.575951.884748.6916
INF1Young developing inflorescences (5mm)33.58830.468632.521931.8342
INF2Developing inflorescences (1-1.5 cm)17.899822.686718.693626.0219
ROORoots from the seedlings (10 cm shoot stage)6.12786.332688.3648110.0809
NODDeveloping tillers at six leaf stage, 3rd internode11.728827.13462.5027112.426
CAR5Developing grain, bracts removed (5 DPA)21.884120.50321.580925.0104
CAR15Developing grain, bracts removed (15 DPA)2.044341.520382.004535.01599



CDS Structure of MLOC_74909






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74909.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74909.1CUST_16108_PI427708080AvailableAvailablecontig_66757 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g51280.1 +1 2e-75 230 112/114 (98%) 13104.m05223 protein DAG protein, chloroplast precursor, putative, expressed
TAIR PP10 AT2G33430.1 +1 5e-67 208 101/109 (93%) | Symbols: DAL1, DAL | differentiation and greening-like 1 | chr2:14162732-14164729 FORWARD LENGTH=219